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Topic: Clade



  
 Development of a homology model for clade A human immunodeficiency virus type 1 gp120 to localize temporal ...
Development of a homology model for clade A human immunodeficiency virus type 1 gp120 to localize temporal substitutions arising in recently infected women -- Poss et al.
A crystal structure for clade B gp120 is available
Development of a homology model for clade A human immunodeficiency virus type 1 gp120 to localize temporal substitutions arising in recently infected women
http://vir.sgmjournals.org/cgi/content/full/85/6/1479

  
 Dictionary
("winged lizards") clade of animals, partly distinguished by a greatly elongated fourth finger that supported a membranous wing, that first evolved in the latter third of the Triassic and survived until the end of the Cretaceous.
in cladistics, an apomorphy that occurs in two related clades and thereby supports grouping of the two clades into a single larger clade --synapomorphy n.
("lizard feet") clade comprised of quadrupedal, plant eating saurischians --sauropod adj.
http://www.dinosauria.com/dml/diction.htm

  
 Evolution of Target Specificity in R1 Clade Non-LTR Retrotransposons -- Kojima and Fujiwara 20 (3): 351 -- Molecular ...
R1 clade have been reported in insects, there is limited information
R1 clade elements from six insect species, D.
novel representatives of the clade from various insects by in
http://mbe.oxfordjournals.org/cgi/content/full/20/3/351

  
 T-cell Activation Leads to Poor Activation of the HIV-1 Clade E Long Terminal Repeat and Weak Association of Nuclear ...
Competition experiments were subsequently conducted with a 5-, 10-, 20-, or 50-fold excess of clade B (SE5648) or clade C (GM6439) unlabeled oligonucleotide.
Samples were then incubated with the enhancer regions of HIV-1 clade B (SE5648; lanes 1–6) and clade E (GM6452; lanes 7–12).
(20 ng/ml)-treated Jurkat cells were incubated with clade C NF-
http://www.jbc.org/cgi/content/full/279/51/52949

  
 Inflorescence diversification in the panicoid "bristle grass" clade (Paniceae, Poaceae): evidence from molecular ...
Setaria clade 2 consists of the rest of the species of Setaria.
to the species in Setaria clade 1, the apex of the 2° axis
evolution in the bristle grass clade and help in the larger
http://www.amjbot.org/cgi/content/full/89/8/1203

  
 Cross-clade inhibition of HIV-1 replication and cytopathology by using RNase P-associated external guide sequences -- ...
clade F by 16 to 18 days postexposure.
HIV-1 clade F, there were no viable cells observed past 16 days
at 14 to 23 days postexposure to HIV-1 clades A, B, and F, the
http://www.pnas.org/cgi/content/full/99/6/3406

  
 Regional Clustering of Shared Neutralization Determinants on Primary Isolates of Clade C Human Immunodeficiency Virus ...
Neutralizing antibodies were measured in PBMC with the early autologous isolate and in either MT-2 or CEMx174 cells with the clade B TCLA strains IIIB (MT-2), MN (MT-2), and SF2 (CEMx174).
Ability of V3 peptides to out-compete the neutralizing activity of clade C serum samples from South Africa.
Inter- and intraclade neutralization of human immunodeficiency virus type 1: genetic clades do not correspond to neutralization serotypes but partially correspond to gp120 antigenic serotypes.
http://jvi.asm.org/cgi/content/full/76/5/2233

  
 Impact of clade diversity on HIV-1 virulence, antiretroviral drug sensitivity and drug resistance -- Spira et al. 51 ...
NNRTI resistance was significantly lower for clade C than clade
Diversity in the pol regions of HIV-1 clade C, corresponding
and time to development of resistance to NNRTIs in clade C isolates
http://jac.oxfordjournals.org/cgi/content/full/51/2/229

  
 The simaruba clade of Bursera
Because of their abundance, incredible species diversity, and often spectacular shapes and colors, these trees are unmistakeable members of the tropical dry forests of Mexico.
Like some other members of the simaruba clade, this species grows in moist canyons in the transition zone between highland pine-oak forest and lowland tropical subdeciduous forest.
Of the nearly 100 species in the genus, more than eighty are found in Mexico.
http://www.explorelifeonearth.org/simaruba.html

  
 Cladistics - Wikipedia, the free encyclopedia
Conversely, one clade or species can be described as nested within another clade.
Each clade is set off by a series of characteristics that appear in its members, but not in the other forms from which it diverged.
In an upright cladogram (one with species listed at the top, and a "root" at the bottom), a species or clade is basal to another clade if it branches off toward the bottom, or below the other group in question.
http://en.wikipedia.org/wiki/Cladistics

  
 Clade Octogen
A clade noted for its nano-dependent physiology and for its resulting skill in the nanotech design and construction.
The clade has experimented much with the nanobones that they possess and has through time found many ways to increase their efficiency.
This minimalism, and the fact that the clade gains no abilities from its improvements that couldn't be achieved much better with other genemods, leads some people to believe that the Octogen aren't really a finished clade, but rather were a prototype used to test the capabilities of their nanobones.
http://www.orionsarm.com/clades/Octogen.html

  
 Clade Temverson
Clade Temverson has been unusually successful in its growth, perhaps due to the demand for it in immersive field theory and engineering and certain fields of meta-insurance.
To a temvert there is no now dividing an unchanging past from an uncertain future, but rather only an eternal now where the immanent (the here-now) is certain while the more remote regions (the far-now) are increasingly uncertain due to lack of information, forgetfulness or complexity of prediction.
In Clade Temversion they are instead symmetrical - memory is experienced in exactly the same way as planning.
http://www.orionsarm.com/clades/Temverson.html

  
 SF REVIEWS.NET: Clade / Mark Budz
He's secured a job at a biotech firm developing special vegetation for a planned orbital colony.
Enter a community for which you have not been claded and the consequences could be sickness or (in extreme cases) death.
A new class system has been introduced through the wonders of biotech; human beings have been socially engineered at the molecular level through a process called "clading," through which entire socioeconomic or ethnic groups are made to be biologically predisposed to live in particular communities and not others.
http://www.sfreviews.net/clade.html

  
 Lab V - Lycophytes (2)
The Rhynie Chert plant, Asteroxylon is a member of this clade.
The clade Lycopsida, of which the living lycopsids are members, also diverged in the Early Devonian.
Variability in appendage arrangement is characteristic of early members of several different clades and may be a clue to the evolution of developmental regulatory mechanisms early in the history of clades.
http://www.ucmp.berkeley.edu/IB181/VPL/Lyco/Lyco2.html

  
 HIV-1 clade promoters strongly influence spatial and temporal dynamics of viral replication in vivo -- Centlivre et al. ...
Clade C has spread rapidly from central Africa down to South
such that on average each clade is differently but optimally
Africa and it is now invading regions where other clades preexisted
http://www.jci.org/cgi/content/full/115/2/348

  
 Clade-Specific Flucytosine Resistance Is Due to a Single Nucleotide Change in the FUR1 Gene of Candida albicans -- ...
Although it has been demonstrated that natural resistance to
clades are shown in the dendrogram of the larger collection
allele is responsible for clade I-specific resistance to 5FC
http://aac.asm.org/cgi/content/full/48/6/2223

  
 Table of HVTN Vaccine Trials
Protein (containing T-helper epitopes from clade B Env, Gag, Pol, Vpu)
Nef-Tat fusion protein + clade B Env subunit
Note: Some participants in each trial will receive placebo injections in place of one or more of the vaccines.
http://chi.ucsf.edu/vaccines/vaccines?page=vc-03-00

  
 Clade - Wikipedia, the free encyclopedia
Taxonomy which requires all taxa to be clades is called cladistics.
A clade is group of organisms which share a common ancestor and which includes all decendents of that ancestor.
A clade may or may not conform to an existing taxon.
http://en.wikipedia.org/wiki/Clade

  
 Science Fiction Book Reviews
Moreover, Clade tends to be cute rather too often.
Clade is never less than readable, and frequently absorbing, as Anthea and Rigo try to find their way out of the maze of hidden dangers they've been dropped into.
In the aftermath, humanity fragmented into clades, groups with a common biochemical signature that allowed them to survive in their own environment.
http://www.scifi.com/sfw/issue348/books.html

  
 PhyloCode Preface
Supraspecific names are often associated with clades under the rank-based codes, but because those names are operationally defined in terms of ranks and types, they often fail to retain their associations with particular clades.
Nevertheless, the PhyloCode is designed for naming clades and, eventually, species.
Under the rank-based codes, it is often difficult to name clades one at a time, similar to the way that new species are named, because the name of a taxon is affected by the taxon¹s rank, which in turn depends on the ranks of more and less inclusive taxa.
http://www.ohiou.edu/phylocode/preface.html

  
 Amazon.com: Books: Clade
Genetically engineered plants and trees pump badly needed oxygen in the air and people like Rigo is a sytech working for Neogenetic's and does his best to work within the system, until he understands that through bioengineering and the use of pherions, the powers that be control what one thinks and feels.
Millions are dead, and the rest have been shuttled into clades.
The science fiction aspects of Clade were pretty good, and I wish more people could see the value and the danger of genetic engineering at the same time.
http://www.amazon.com/exec/obidos/tg/detail/-/0553586580?v=glance

  
 PhyloCode Article 9
An apomorphy-based definition may take the form "the clade stemming from the first organism or species to possess apomorphy M as inherited by A" or "the most inclusive clade exhibiting character (state) M synapomorphic with that in A." An apomorphy-based definition may be abbreviated "clade (M in A)".
The names of clades may be established through conversion of preexisting names or introduction of new names.
The last two definition types are designed to tie names to crown clades (i.e., a clade within which both of the basal branches have extant representatives).
http://www.ohiou.edu/phylocode/art9.html

  
 CCR5 and CXCR4 Usage by Non-Clade B Human Immunodeficiency Virus Type 1 Primary Isolates -- Thompson et al. 76 (6): ...
residues in C4 and the V3 stem of a clade B R5 gp120 (13, 14).
The name and clade of each isolate are indicated in the first two columns and the mutated residues are indicated in the top row of each panel.
in contrast to clade B isolates, a cluster of residues in the
http://jvi.asm.org/cgi/content/full/76/6/3059

  
 The SHINE Clade of AP2 Domain Transcription Factors Activates Wax Biosynthesis, Alters Cuticle Properties, and Confers ...
SHN clade in plant protective layers, such as those formed during
The SHINE Clade of AP2 Domain Transcription Factors Activates Wax Biosynthesis, Alters Cuticle Properties, and Confers Drought Tolerance when Overexpressed in Arabidopsis
The SHINE Clade of AP2 Domain Transcription Factors Activates Wax Biosynthesis, Alters Cuticle Properties, and Confers Drought Tolerance when Overexpressed in Arabidopsis -- Aharoni et al.
http://www.plantcell.org/cgi/content/abstract/16/9/2463

  
 THE THERIAN CLADE
[1] The Atlantogenata (a newly named clade that couples the southern hemisphere South American Xenarthrans [sloths, anteaters, and armadillos] with the largely African golden moles [Chrysochloridae] and tenrecs [Tenricidae], elephant shrews [Macroscelidea], aardvarks [Tubulidentata], and Paenungulata [elephants (Proboscidea), dugongs and sea-cows (Sirenia), and hyraxes (Hyracoidea)].
The archantan clade is termed Euarchonta to reflect the exclusion of the bats, and dermopterans and primates are collectively named the Primatomorpha to reflect their sister relationship.
The linkage of the African groups as a single phylogenetic clade is a unique perspective derived from molecular data; this hypothesis has not been proposed from morphological analyses.
http://ib.berkeley.edu/courses/ib173/lectures/lecture5/5-therian.html

  
 Clade Group
Clade Investment Management provides enhanced indexed products with liquidity and low volatility.
Clade provides a wide range of strategic advisory services, and is proud of the fact that these services are provided not only to the corporate elite (including several of the largest organizations in South Africa) [ more ]
Clade Investment Management grew out of a successful investment management program developed by Clade to manage it’s own funds, and those of it’s members and staff.
http://www.catalystii.net

  
 What do terms like monophyletic, paraphyletic and polyphyletic mean?
Monophyletic groups are also called clades, and are generally considered as the only ``natural'' kind of group.
Groups may also be doubly paraphyletic, thrice paraphyletic, etc.
Because clades are so important, there is common notation for specifying them (taken from the Phylocode: see note 9.4.1 in http://www.ohiou.edu/phylocode/art9.html).
http://www.miketaylor.org.uk/dino/faq/s-class/phyletic

  
 HIV Resistance May Be Clade Dependent
Further, while that balance may still favor using the regimen in many developing countries, as antiretrovirals become more widely available, regimens that are more effective and less likely to lead to the development of viral resistance, regardless of HIV clade, should be used in its stead.
While the pattern of resistance mutations was similar among patients infected with different HIV clades, the risk of developing Viramune resistance was higher in patients infected with Clade D than those infected with Clade A (adjusted OR, 4.94; 95% CI, 1.21-20.22).
Unfortunately, however, this single dose of Viramune also resulted in the development of viral resistance to Viramune in approximately 20% of the women and their infants, many of who had the K103N mutation that signals cross-resistance among the non-nucleoside reverse transcriptase inhibitor (NNRTI) class.
http://www.hivandhepatitis.com/recent/resistance/092101i.html

  
 PhyloCode
The rules for clade names will almost certainly be implemented before those for species names because the latter have not yet been drafted.
Only clade names are covered by the current version of the PhyloCode.
A second workshop was held at Yale University in July 2002, at which some modifications were made in the rules and recommendations of the PhyloCode.
http://www.ohiou.edu/phylocode

  
 Forum on Choosing Your Meds: HIV C Clade
Previous studies have shown that patients with Clade C may develop different patterns of viral resistance if therapy fails compared to Clade B. But there is no reason to think that clade C progresses more rapidly or has a poorer prognosis.
Of the 635 patients in the trial, most were infected with Clade B (80%).
Would a person with C Clade likely live a shorter life on average than one with B? Is it possbile to find people who know how to treat C Clade in the Bay Area, CA?
http://www.thebody.com/Forums/AIDS/Starting/Current/Q163326.html

  
 Favorable and Unfavorable HLA Class I Alleles and Haplotypes in Zambians Predominantly Infected with Clade C Human ...
the case in this clade C-infected Zambian population.
of disease progression in Caucasians with clade B infection
Favorable and Unfavorable HLA Class I Alleles and Haplotypes in Zambians Predominantly Infected with Clade C Human Immunodeficiency Virus Type 1
http://jvi.asm.org/cgi/content/full/76/16/8276

  
 NCBI Pig Genome Resources
Pigs exist in both feral and domesticated populations, which have distinct phenotypes and karyotypes.
The pig (Sus scrofa) is an important model organism for health issues such as obesity, cardiovascular disease, and organ transplantation.
It represents the artiodactyls, or cloven-hoofed mammals, which are an evolutionary clade distinct from the primates and rodents.
http://www.ncbi.nlm.nih.gov/genome/guide/pig

  
 Functional specificity of Candida albicans Als3p proteins and clade specificity of ALS3 alleles discriminated by the ...
Analysis of allelic pairing showed clade differences and the
of ALS3 allelic diversity across the five major genetic clades
Functional specificity of Candida albicans Als3p proteins and clade specificity of ALS3 alleles discriminated by the number of copies of the tandem repeat sequence in the central domain -- Oh et al.
http://mic.sgmjournals.org/cgi/content/abstract/151/3/673

  
 Innovative website designer and developer for businesses of all sizes - Organisations - Individuals - Effective and ...
From online forms to content management systems, we can develop solutions to help you stay in touch with your customers.
At Clade, we will work with you, exploring your requirements and objectives .
The success of your website depends largely on its look, feel and user perception .
http://www.clade.co.uk

  
 Merriam-Webster Online
For More Information on "clade" go to Britannica.com
Get the Top 10 Search Results for "clade"
http://www.m-w.com/cgi-bin/dictionary?book=Dictionary&va=clade

  
 CLADE 2005
Advances in networking, high-end computers, large data stores and middleware capabilities are ushering in a new era of large scale, distributed applications, which dynamically marshal resources across a heterogeneous, distributed environment.
The CLADE 2005 workshop will be held in conjunction with the 14th International Symposium on High Performance Distributed Computing (
http://www.cs.umd.edu/~als/CLADE2005

  
 Antibiotic Production by a Roseobacter Clade-Affiliated Species from the German Wadden Sea and Its Antagonistic Effects ...
A strain affiliated with the Roseobacter clade and producing
of the Roseobacter clade revealed a distinct cluster of T5 and
Received 30 September 2003/ Accepted 14 January 2004
http://aem.asm.org/cgi/content/full/70/4/2560

  
 Clade2003
CLADE 2003 invites authors to submit peer-reviewable papers on original and unpublished work (up to 10 pages not including figures and references) at clade2003@cs.msstate.edu.
http://www.cs.msstate.edu/~clade2003

  
 CLADE 2004 - Advance Program
Challenges of Large Applications in Distributed Environments (CLADE)
An on demand path marking and capacity reservation method using
In conjunction with the 13th International Symposium on High Performance Distributed Computing (HPDC-13)
http://www.caip.rutgers.edu/clade2004/program.html

  
 Z250 Platyhelminthes Clade (2005)
TRAITS SUPPORTING EACH CLADE(** plesiomorphic- a primitive state, not unique to clade):
http://www.biology.ualberta.ca/courses.hp/zool250/Clades/clade06-Platyhelm.htm

  
 Evolutionary Dynamics in a Novel L2 Clade of Non-LTR Retrotransposons in Deuterostomia -- Lovsin et al. 18 (12): 2213 ...
Evolutionary Dynamics in a Novel L2 Clade of Non-LTR Retrotransposons in Deuterostomia -- Lovsin et al.
http://mbe.oupjournals.org/cgi/reprint/18/12/2213

  
 Dr. Rajkumar Buyya's Home Page
Martin Placek and Rajkumar Buyya, G-Monitor: Gridbus web portal for monitoring and steering application execution on global grids, Proceedings of the International Workshop on Challenges of Large Applications in Distributed Environments (CLADE 2002), In conjunction with the 12th International Symposium on High Performance Distributed Computing (HPDC 2003), June 21-24, 2003 Seattle, USA.
http://www.buyya.com/cv.html

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